A B C D E F G H I K L M N O P Q R S T U V W X Y Z

R

R - Static variable in class net.sf.ij_plugins.filters.FastMedianAS

number of rows in the window

RedBlackTree<K extends java.lang.Comparable<K>> - Class in net.sf.ij_plugins.util

Implements a red-black tree.

RedBlackTree() - Constructor for class net.sf.ij_plugins.util.RedBlackTree

RedBlackTreeFloat - Class in net.sf.ij_plugins.filters

Implements a red-black tree.

RedBlackTreeFloat() - Constructor for class net.sf.ij_plugins.filters.RedBlackTreeFloat

Region - Class in net.sf.ij_plugins.ui.multiregion

Region(String, Color) - Constructor for class net.sf.ij_plugins.ui.multiregion.Region

RegionGrowingPlugIn - Class in net.sf.ij_plugins.grow

ImageJ plugin for running Seeded Region Growing.

RegionGrowingPlugIn() - Constructor for class net.sf.ij_plugins.grow.RegionGrowingPlugIn

RegionGrowingToolPlugIn - Class in net.sf.ij_plugins.grow

ImageJ plugin for running Seeded Region Growing with UI for drawing regions.

RegionGrowingToolPlugIn() - Constructor for class net.sf.ij_plugins.grow.RegionGrowingToolPlugIn

RegionGrowingView - Class in net.sf.ij_plugins.grow

RegionGrowingView() - Constructor for class net.sf.ij_plugins.grow.RegionGrowingView

Creates new form RegionGrowingView

remove(float) - Method in class net.sf.ij_plugins.filters.RedBlackTreeFloat

remove() - Method in class net.sf.ij_plugins.multiband.VectorProcessor.Iterator

Not supported.

remove() - Method in class net.sf.ij_plugins.multiband.VectorProcessor.PixelIterator

Not supported.

remove() - Method in class net.sf.ij_plugins.operators.PixelIterator

remove(K) - Method in class net.sf.ij_plugins.util.RedBlackTree

removeAllProgressListener() - Method in class net.sf.ij_plugins.filters.AbstractAnisotropicDiffusion

removeAllProgressListener() - Method in class net.sf.ij_plugins.util.progress.DefaultProgressReporter

removeAllProgressListener() - Method in interface net.sf.ij_plugins.util.progress.ProgressReporter

Remove all progress listener.

removeAllProgressReporter() - Method in class net.sf.ij_plugins.util.progress.ProgressAccumulator

removeProgressListener(ProgressListener) - Method in class net.sf.ij_plugins.filters.AbstractAnisotropicDiffusion

removeProgressListener(ProgressListener) - Method in class net.sf.ij_plugins.util.progress.DefaultProgressReporter

removeProgressListener(ProgressListener) - Method in interface net.sf.ij_plugins.util.progress.ProgressReporter

Remove progress listener.

removeProgressReporter(ProgressReporter) - Method in class net.sf.ij_plugins.util.progress.ProgressAccumulator

removePropertyChangeListener(PropertyChangeListener) - Method in class net.sf.ij_plugins.beans.AbstractModel

removePropertyChangeListener(String, PropertyChangeListener) - Method in class net.sf.ij_plugins.beans.AbstractModel

removePropertyChangeListener(PropertyChangeListener) - Method in interface net.sf.ij_plugins.beans.Model

removePropertyChangeListener(String, PropertyChangeListener) - Method in interface net.sf.ij_plugins.beans.Model

reset(int, int) - Method in interface net.sf.ij_plugins.filters.IRunningMedianFloatOperator

reset(int, int) - Method in class net.sf.ij_plugins.filters.RunningMedianOperator

reset(int, int) - Method in class net.sf.ij_plugins.filters.RunningMedianRBTOperator

RESULTS_WINDOW_TITLE - Static variable in class net.sf.ij_plugins.clustering.KMeansClusteringPlugin

rewind() - Method in class net.sf.ij_plugins.operators.PixelIterator

Reset iterator to its initial position

rgbToLabVectorProcessor(ColorProcessor) - Static method in class net.sf.ij_plugins.color.ColorSpaceConversion

Convert between RGB and CIE L*a*b* color image representation.

rgbToXYZ(float[], float[]) - Static method in class net.sf.ij_plugins.color.ColorSpaceConversion

sRGB to XYZ conversion based on conversion coefficients at: http://www.brucelindbloom.com/Eqn_RGB_to_XYZ.html
See also conversion from sRGB to CIE XYZ as defined in the IEC 619602-1 standard (http://www.colour.org/tc8-05/Docs/colorspace/61966-2-1.pdf), though it uses approximated coefficients.

rgbToXYZVectorProcessor(ColorProcessor) - Static method in class net.sf.ij_plugins.color.ColorSpaceConversion

Convert between sRGB and XYZ color image representation.

rgbToYCbCr(ColorProcessor, ProgressListener) - Static method in class net.sf.ij_plugins.color.ColorSpaceConversion

Converts image pixels from RGB color space to YCbCr color space.

rgbToYCbCr(ColorProcessor) - Static method in class net.sf.ij_plugins.color.ColorSpaceConversion

Converts image pixels from RGB color space to YCbCr color space.

rightOnePixel() - Method in class net.sf.ij_plugins.quilting.Patch

This moves the patch one pixel to the right if able.

run(ImageStack) - Method in class net.sf.ij_plugins.clustering.KMeans2D

Perform k-means clustering of the input stack.

run(ImageStack) - Method in class net.sf.ij_plugins.clustering.KMeans3D

Perform k-means clustering of the input stack.

run(String) - Method in class net.sf.ij_plugins.clustering.KMeansClusteringPlugin

run(String) - Method in class net.sf.ij_plugins.clustering.KMeansClusteringReapplyPlugin

run(ColorProcessor) - Method in class net.sf.ij_plugins.color.ColorHistogram

Create histogram

run(String) - Method in class net.sf.ij_plugins.color.ConvertLabStackToRGBPlugin

run(String) - Method in class net.sf.ij_plugins.color.ConvertLabStackToXYZPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.color.ConvertRGBToLabStackPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.color.ConvertRGBToXYZStackPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.color.ConvertRGBToYCbCrPlugin

run(String) - Method in class net.sf.ij_plugins.color.ConvertXYZStackToLabPlugin

run(String) - Method in class net.sf.ij_plugins.color.ConvertXYZStackToRGBPlugin

run(String) - Method in class net.sf.ij_plugins.color.ConvertYCbCrToRGBPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.color.IntensityShiftPlugin

run(String) - Method in class net.sf.ij_plugins.color.MeasureBandsPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.filters.AbstractAnisotropicDiffusionPlugin

run(FloatProcessor) - Method in class net.sf.ij_plugins.filters.CoherenceEnhancingDiffusionFilter

run(ImageProcessor) - Method in class net.sf.ij_plugins.filters.CoherenceEnhancingDiffusionPlugin

run(FloatProcessor) - Method in class net.sf.ij_plugins.filters.DirectionalCoherenceFilter

run(ImageProcessor) - Method in class net.sf.ij_plugins.filters.DirectionalCoherencePlugin

run(ByteProcessor) - Method in class net.sf.ij_plugins.filters.FastMedianAS

run(ImageProcessor) - Method in class net.sf.ij_plugins.filters.FastMedianPlugin

run(FloatProcessor) - Method in class net.sf.ij_plugins.filters.FluxAnisotropicDiffusionFilter

run(ImageProcessor) - Method in class net.sf.ij_plugins.filters.GaussianSmoothFilter

Run Gaussian smooth filtering.

run(FloatProcessor) - Method in class net.sf.ij_plugins.filters.RunningFilter

run(String) - Method in class net.sf.ij_plugins.grow.RegionGrowingPlugIn

run(String) - Method in class net.sf.ij_plugins.grow.RegionGrowingToolPlugIn

run(ImagePlus) - Static method in class net.sf.ij_plugins.im3d.filters.AutoCrop3D

run(String) - Method in class net.sf.ij_plugins.im3d.filters.AutoCrop3DPlugin

Main processing method for the net.sf.ij_plugins.im3d.filters.AutoClipVolumePlugin plugin

run(String) - Method in class net.sf.ij_plugins.im3d.filters.Median3DPlugin

run(String) - Method in class net.sf.ij_plugins.im3d.filters.MorphologicalDilate3DPlugin

Main processing method for the net.sf.ij_plugins.im3d.filters.MorphologicalDilate3DPlugin plugin

run(String) - Method in class net.sf.ij_plugins.im3d.filters.MorphologicalErode3DPlugin

Main processing method for the net.sf.ij_plugins.im3d.filters.MorphologicalErode3DPlugin plugin

run(ImageStack, Point3DInt) - Method in class net.sf.ij_plugins.im3d.grow.ConnectedThresholdFilterBase

Main processing method for the ConnectedThresholdFilter object

run(String) - Method in class net.sf.ij_plugins.im3d.grow.ConnectedThresholdGrowerPlugin

Main processing method for the net.sf.ij_plugins.im3d.grow.ConnectedThresholdGrowerPlugin plugin

run() - Method in class net.sf.ij_plugins.im3d.grow.SRG3D

Perform region growing.

run(String) - Method in class net.sf.ij_plugins.io.ExportAsSTLPlugIn

run(String) - Method in class net.sf.ij_plugins.io.metaimage.MetaImageReaderPlugin

run(String) - Method in class net.sf.ij_plugins.io.metaimage.MetaImageWriterPlugin

run(String) - Method in class net.sf.ij_plugins.io.vtk.VtkReaderPlugin

run(String) - Method in class net.sf.ij_plugins.io.vtk.VtkWriterPlugin

Main processing method for the VtkEncoder plugin

run(ImagePlus) - Static method in class net.sf.ij_plugins.multiband.VectorDifferenceEdgeOperator

run(VectorProcessor) - Static method in class net.sf.ij_plugins.multiband.VectorDifferenceEdgeOperator

run(String) - Method in class net.sf.ij_plugins.multiband.VectorEdgeDetectorPlugin

Values of the arg argument: 'about' - show short help message.

run(ImagePlus) - Static method in class net.sf.ij_plugins.multiband.VectorGradientEdgeOperator

run(VectorProcessor) - Static method in class net.sf.ij_plugins.multiband.VectorGradientEdgeOperator

run(ImagePlus) - Static method in class net.sf.ij_plugins.multiband.VectorSobelEdgeOperator

run(VectorProcessor) - Static method in class net.sf.ij_plugins.multiband.VectorSobelEdgeOperator

run(ImageProcessor) - Method in class net.sf.ij_plugins.quilting.ImageQuilterPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.thresholding.MaximumEntropyMultiThresholdPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.thresholding.MaximumEntropyThresholdPlugin

run(ImageProcessor) - Method in class net.sf.ij_plugins.util.SetPixelsPlugin

runInPlace(ImageProcessor) - Method in class net.sf.ij_plugins.filters.GaussianSmoothFilter

Run Gaussian smooth filtering in place.

RunningFilter - Class in net.sf.ij_plugins.filters

Implements iterations over an RunningMedianOperator.

RunningFilter(IRunningMedianFloatOperator, int, int) - Constructor for class net.sf.ij_plugins.filters.RunningFilter

Construct a filter using a given operator.

RunningMedianOperator - Class in net.sf.ij_plugins.filters

RunningMedianOperator() - Constructor for class net.sf.ij_plugins.filters.RunningMedianOperator

RunningMedianRBTOperator - Class in net.sf.ij_plugins.filters

RunningMedianRBTOperator() - Constructor for class net.sf.ij_plugins.filters.RunningMedianRBTOperator

A B C D E F G H I K L M N O P Q R S T U V W X Y Z