IJ Plugins: 3D Toolkit
Those filters interpret an image stack as a 3D image.
- Connected Threshold Grower - region growing segmentation (example).
- Auto Clip Volume - Auto volume clipping to a region that contains non-zero pixels.
- Morphological Dilate 3D - grey level dilation (max).
- Morphological Erode 3D - grey level erosion (min).
- Median 3D - correctly processes all pixes including borders.
Plugins install under Plugins > 3D Toolkit menu.
Download and Installation
The 3D Toolkit plugins are part of ij-Plugins Toolkit.
Download and installation are described here