JAI ImageIO plugins for ImageJ - API
A B C D E F G H I J M N P R S T U W

A

ARG_IMAGE_PREVIEW - Static variable in class net.sf.ij.plugin.ImageIOOpenPlugin
Argument passed to run method to use open dialog with an image preview.
ARG_SIMPLE - Static variable in class net.sf.ij.plugin.ImageIOOpenPlugin
Argument passed to run method to use standard Image/J open dialog.
AboutImageIO - class net.sf.ij.plugin.AboutImageIO.
 
AboutImageIO() - Constructor for class net.sf.ij.plugin.AboutImageIO
 
accept(File) - Method in class net.sf.ij.jaiio.JAIFileFilter
Whether the given file is accepted by this filter.

B

BufferedImageCreator - class net.sf.ij.jaiio.BufferedImageCreator.
Creates/converts BufferedImage objects from Image/J's ImageProcessor or ImagePlus.

C

centerOnScreen(Window, boolean) - Static method in class net.sf.ij.jaiio.JaiioUtil
Center window on screen.
centerOnScreen(Window, boolean) - Static method in class net.sf.ij.swing.SwingUtils
 
codecName - Variable in class net.sf.ij.jaiio.JAIReader.ImageInfo
 
create(ImagePlus, int) - Static method in class net.sf.ij.jaiio.BufferedImageCreator
Create BufferedImage from a slice sliceNb in image src .
create(ByteProcessor) - Static method in class net.sf.ij.jaiio.BufferedImageCreator
Create BufferedImage from ByteProcessor.
create(ByteProcessor, IndexColorModel) - Static method in class net.sf.ij.jaiio.BufferedImageCreator
Create BufferedImage from an 256 indexed color image.
create(ShortProcessor) - Static method in class net.sf.ij.jaiio.BufferedImageCreator
Create BufferedImage from ShortProcessor.
create(FloatProcessor) - Static method in class net.sf.ij.jaiio.BufferedImageCreator
Create BufferedImage from FloatProcessor.
create(ColorProcessor) - Static method in class net.sf.ij.jaiio.BufferedImageCreator
Create BufferedImage from ColorProcessor.
create(WritableRaster, ColorModel) - Static method in class net.sf.ij.jaiio.ImagePlusCreator
Create instance of ImagePlus from WritableRaster r and ColorModel cm.
createArray(ImagePlus) - Static method in class net.sf.ij.jaiio.BufferedImageCreator
Create BufferedImages corresponding to each slice in the source image.
createJAIOpenChooser() - Static method in class net.sf.ij.jaiio.JAIFileChooserFactory
Creates an image file open chooser with an image preview.
createJAISaveChooser() - Static method in class net.sf.ij.jaiio.JAIFileChooserFactory
Creates file save chooser with file filters corresponding to JAI codecs supporting writing (encoders).
createProcessor(int, int, DataBuffer, ColorModel) - Static method in class net.sf.ij.jaiio.ImagePlusCreator
Create an ImageProcessor object from a DataBuffer.

D

DescriptionStringCoder - class net.sf.ij.jaiio.DescriptionStringCoder.
Decodes and encodes description strings used by ImageJ to store extra image info in TIFF description field.
decode(String, ImagePlus) - Static method in class net.sf.ij.jaiio.DescriptionStringCoder
Decode the ImageDescription tag.

E

EncoderParamDialog - class net.sf.ij.jaiio.EncoderParamDialog.
 
EncoderParamDialog() - Constructor for class net.sf.ij.jaiio.EncoderParamDialog
 
encode(ImagePlus) - Static method in class net.sf.ij.jaiio.DescriptionStringCoder
Creates an optional image description string for saving calibration data.

F

file - Variable in class net.sf.ij.jaiio.JAIFilePreviewer
Description of the Field
forceTileUpdate(RenderedImage) - Static method in class net.sf.ij.jaiio.ImagePlusCreator
Force Rendered image to set all the tails that it may have.

G

getCodecName() - Method in class net.sf.ij.jaiio.JAIFileFilter
Gets the CodecName attribute of the JAIFileFilter object.
getDescription() - Method in class net.sf.ij.jaiio.JAIFileFilter
Gets the Description attribute of the ExtensionFileFilter object
getFormatName() - Method in class net.sf.ij.jaiio.JAIWriter
Gets the FormatName attribute of the JAIWriter object
getFormatNames() - Static method in class net.sf.ij.jaiio.JAIWriter
Gets all supported format names.
getImageEncodeParam(boolean) - Method in class net.sf.ij.jaiio.EncoderParamDialog
 
getImageEncodeParam(boolean) - Method in class net.sf.ij.jaiio.TIFFEncodeParamPanel
Gets the imageEncodeParam attribute of the TIFFEncodeParamPanel object
getNumPages() - Method in class net.sf.ij.jaiio.ImagePageSelectionDialog
Gets number of pages.
getPageIndex() - Method in class net.sf.ij.jaiio.ImageFileChooser
Return index of pages selected for current file using page selection dialog.
getPageIndex() - Method in class net.sf.ij.jaiio.ImagePageSelectionDialog
Returns array of selected page indexes.
getPageIndex() - Method in class net.sf.ij.jaiio.JAIFilePreviewer
Gets the PageIndex attribute of the JAIFilePreviewer object

H

HelpPanel - class net.sf.ij.plugin.HelpPanel.
A panel displaying help for the Image I/O plugin bundle.
HelpPanel() - Constructor for class net.sf.ij.plugin.HelpPanel
Default constructor.

I

ImageFileChooser - class net.sf.ij.jaiio.ImageFileChooser.
Extension of JFileChooser with ability to return pages selected in multi-image files (e.g.
ImageFileChooser(File) - Constructor for class net.sf.ij.jaiio.ImageFileChooser
Constructor for the ImageFileChooser object
ImageIOOpenPlugin - class net.sf.ij.plugin.ImageIOOpenPlugin.
Opens file chooser dialog and open the image using JAI codec.
ImageIOOpenPlugin() - Constructor for class net.sf.ij.plugin.ImageIOOpenPlugin
 
ImageIOSaveAsPlugin - class net.sf.ij.plugin.ImageIOSaveAsPlugin.
Saves an image using JAI codecs.
ImageIOSaveAsPlugin() - Constructor for class net.sf.ij.plugin.ImageIOSaveAsPlugin
 
ImagePageSelectionDialog - class net.sf.ij.jaiio.ImagePageSelectionDialog.
Dialog for selecting pages in multi-image files.
ImagePageSelectionDialog(Frame, String, boolean) - Constructor for class net.sf.ij.jaiio.ImagePageSelectionDialog
Constructor for the ImagePageSelectionDialog object
ImagePageSelectionDialog() - Constructor for class net.sf.ij.jaiio.ImagePageSelectionDialog
Constructor for the ImagePageSelectionDialog object
ImagePlusCreator - class net.sf.ij.jaiio.ImagePlusCreator.
Creates/converts Image/J's image objects from Java2D/JAI representation.
iconSizeX - Variable in class net.sf.ij.jaiio.JAIFilePreviewer
Description of the Field
iconSizeY - Variable in class net.sf.ij.jaiio.JAIFilePreviewer
Description of the Field
isAccepted() - Method in class net.sf.ij.jaiio.EncoderParamDialog
 
isBinary(ImageProcessor) - Static method in class net.sf.ij.jaiio.JaiioUtil
Return true if this image color map has only two entries.

J

JAIFileChooserFactory - class net.sf.ij.jaiio.JAIFileChooserFactory.
Factory for creation of JAI IO customized file choosers.
JAIFileChooserFactory() - Constructor for class net.sf.ij.jaiio.JAIFileChooserFactory
 
JAIFileFilter - class net.sf.ij.jaiio.JAIFileFilter.
File filter that detects image files supported by registered JAI codecs.
JAIFileFilter() - Constructor for class net.sf.ij.jaiio.JAIFileFilter
Create file filter accepting all images supported by registered JAI codecs.
JAIFileFilter(String) - Constructor for class net.sf.ij.jaiio.JAIFileFilter
Create file filter accepting images supported by given codec.
JAIFilePreviewer - class net.sf.ij.jaiio.JAIFilePreviewer.
A utility for JAIFIleChooser that displays preview image, image file size, and image dimensions.
JAIFilePreviewer() - Constructor for class net.sf.ij.jaiio.JAIFilePreviewer
Constructor for the FilePreviewer object
JAIFilePreviewer(JFileChooser) - Constructor for class net.sf.ij.jaiio.JAIFilePreviewer
Creates new FilePreviewer
JAIReader - class net.sf.ij.jaiio.JAIReader.
Read image files using JAI image I/O codec (http://developer.java.sun.com/developer/sampsource/jai/) and convert them to Image/J representation.
JAIReader.ImageInfo - class net.sf.ij.jaiio.JAIReader.ImageInfo.
 
JAIReader.ImageInfo() - Constructor for class net.sf.ij.jaiio.JAIReader.ImageInfo
 
JAIWriter - class net.sf.ij.jaiio.JAIWriter.
Writes images to files using JAI image I/O codec .
JAIWriter() - Constructor for class net.sf.ij.jaiio.JAIWriter
Constructor for the JAIWriter object
JaiioUtil - class net.sf.ij.jaiio.JaiioUtil.
 

M

MIN_IMAGE_FILE_SIZE - Static variable in class net.sf.ij.jaiio.JAIFileFilter
Files smaller then min size are ignored by the filter.
main(String[]) - Static method in class net.sf.ij.jaiio.EncoderParamDialog
 
main(String[]) - Static method in class net.sf.ij.jaiio.TIFFEncodeParamPanel
The main program for the TIFFEncodeParamBox class
main(String[]) - Static method in class net.sf.ij.plugin.HelpPanel
 

N

net.sf.ij.jaiio - package net.sf.ij.jaiio
Image I/O library implements core functionality of ij-plugins  Image I/O bundle.
net.sf.ij.plugin - package net.sf.ij.plugin
 
net.sf.ij.swing - package net.sf.ij.swing
 
numberOfPages - Variable in class net.sf.ij.jaiio.JAIReader.ImageInfo
 

P

previewImage - Variable in class net.sf.ij.jaiio.JAIReader.ImageInfo
 
propertyChange(PropertyChangeEvent) - Method in class net.sf.ij.jaiio.JAIFilePreviewer
Updates image preview when received JFileChooser.SELECTED_FILE_CHANGED_PROPERTY event.
propertyChange(PropertyChangeEvent) - Method in class net.sf.ij.jaiio.SaveImageFileChooser
This method gets called when a bound property is changed.

R

RemoveOldPlugins - class net.sf.ij.plugin.RemoveOldPlugins.
Plugin for uninstalling JAI Image IO plugin bundle version 1.0.5 or ealier.
RemoveOldPlugins() - Constructor for class net.sf.ij.plugin.RemoveOldPlugins
 
read(File) - Static method in class net.sf.ij.jaiio.JAIReader
Open image in the file using registered codecs.
read(File, int[]) - Static method in class net.sf.ij.jaiio.JAIReader
Open image in the file using registered codecs.
readFirstImageAndInfo(File) - Static method in class net.sf.ij.jaiio.JAIReader
Read only the first image in the file.
run(String) - Method in class net.sf.ij.plugin.AboutImageIO
 
run(String) - Method in class net.sf.ij.plugin.ImageIOOpenPlugin
Main processing method for the ImageIOOpenPlugin object.
run(String) - Method in class net.sf.ij.plugin.ImageIOSaveAsPlugin
Main processing method for the ImageIOSaveAsPlugin object
run(String) - Method in class net.sf.ij.plugin.RemoveOldPlugins
 

S

SaveImageFileChooser - class net.sf.ij.jaiio.SaveImageFileChooser.
Extension of JFileChooser with ability to return pages selected in multi-image files (e.g.
SaveImageFileChooser(File) - Constructor for class net.sf.ij.jaiio.SaveImageFileChooser
Constructor for the ImageFileChooser object
SwingUtils - class net.sf.ij.swing.SwingUtils.
 
SwingUtils() - Constructor for class net.sf.ij.swing.SwingUtils
 
setFormatName(String) - Method in class net.sf.ij.jaiio.JAIWriter
Sets the FormatName attribute of the JAIWriter object
setImageEncodeParam(ImageEncodeParam) - Method in class net.sf.ij.jaiio.JAIWriter
 
setNumPages(int) - Method in class net.sf.ij.jaiio.ImagePageSelectionDialog
Set number of pages in the current image file.

T

TIFFEncodeParamPanel - class net.sf.ij.jaiio.TIFFEncodeParamPanel.
Component for editing TIFF encoding options represented by non_com.media.jai.codec.TIFFEncodeParam.
TIFFEncodeParamPanel() - Constructor for class net.sf.ij.jaiio.TIFFEncodeParamPanel
Constructor for the TIFFEncodeParamBox object

U

UnsupportedImageFileFormatException - exception net.sf.ij.jaiio.UnsupportedImageFileFormatException.
Used to indicate that an attempt was made to read in unsupported format.
UnsupportedImageFileFormatException(String) - Constructor for class net.sf.ij.jaiio.UnsupportedImageFileFormatException
 
UnsupportedImageModelException - exception net.sf.ij.jaiio.UnsupportedImageModelException.
May be thrown when uncountared an image that is unable to intrepret.
UnsupportedImageModelException(String) - Constructor for class net.sf.ij.jaiio.UnsupportedImageModelException
 

W

write(String, ImagePlus) - Method in class net.sf.ij.jaiio.JAIWriter
Write image im to file fileName.

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